BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C12LP1|AL427465
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1533 1535 0.0
>3x_Contig1533
Length = 11082
Score = 1535 bits (766), Expect = 0.0
Identities = 795/814 (97%)
Strand = Plus / Minus
Query: 1 tagtcaataagaganattcatattcacttagtttggttccattagaaagtttgaacatac 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 tagtcaataagagatattcatattcacttagtttggttccattagaaagtttgaacatac 1028
Query: 61 caatagtctcttcataaacggtaccgttacaattcatatgatcytcagtatactgaacgt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1027 caatagtctcttcataaacggtaccgttacaattcatatgatcttcagtatactgaacgt 968
Query: 121 gcattttattgtattggccattgaagctttggacttcttttagaaccattgaatagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 gcattttattgtattggccattgaagctttggacttcttttagaaccattgaatagaaaa 908
Query: 181 tgtaccggaaatgtgattcatctatcctttggtcatcgatggtttcactgccatcatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 tgtaccggaaatgtgattcatctatcctttggtcatcgatggtttcactgccatcatcaa 848
Query: 241 atacaatactcataataccaggtatacgtggctgagatgttgtgtccatcccgtttttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 atacaatactcataataccaggtatacgtggctgagatgttgtgtccatcccgtttttca 788
Query: 301 cttgaatatttaacatgggaaataagatatctgtwacagcgtcactgacacatcttgaca 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 787 cttgaatatttaacatgggaaataagatatctgtaacagcgtcactgacacatcttgaca 728
Query: 361 aaagcccgtcattctttttattgttgcccttttcgtactgaaggtttagtttttgcatga 420
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aaagctcgttattctttttattgttgcccttttcgtactgaaggtttagtttttgcatga 668
Query: 421 ggtatggcaaatttctgttcccacaattgamataactagcaactaccaataatcgttctt 480
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 667 ggtatggcaaatttctgtacccacaattgaaataactagcaactaccaataatcgttctt 608
Query: 481 tctcataggactcagtgtactgttcaattttactcaaaaatctctctatttgagtnaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 607 tctcataggactcagtgtactgttcaattttactcaaaaatctctctatttgagttaaaa 548
Query: 541 ccacagttattctgtcgtcatcctttgtaaaacctaattgtttcctattaagtttggctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccacagttattctgtcgtcatcctttgtaaaacctaattgtttcctattaagtttggctt 488
Query: 601 tcaatttgataacatgtggcactacagcgtctttataactgcttaaggcagaaakcaaat 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 487 tcaatttgataacatgtggcactacagcgtctttataactgcttaaggcagaaagcaaat 428
Query: 661 acctcgatgttgtctctkgactattgaaaaaagctgwwatcgtctgaaatgggwtcaaaw 720
||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||
Sbjct: 427 acctcgatgttgtctctggactattgaaaaaagctgttatcgtctgaaatggtttcaaaa 368
Query: 721 kaataatatwcactctkatgcattcaaagtcgaattcatcaagcaatgaacttaacgatc 780
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaataatatacactctgatgcattcaaagtcgaattcatcaagcaatgaacttaacgatc 308
Query: 781 cctctttkatcaactgtagcagacatggtgccaa 814
||||||| ||||||||||||||||||||||||||
Sbjct: 307 cctctttgatcaactgtagcagacatggtgccaa 274
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5561
Number of Sequences: 1807
Number of extensions: 5561
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)